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  • Bruno Vellutini 16:18 on 2014/01/21 Permalink
    Tags: gene expression, phylogenomics, , transcriptome   

    Dunn Lab – Brown University – Winter 2014 


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    From 20/01/2014 to 14/02/2014 I’m staying at Casey Dunn’s Lab to analyze RNAseq data from priapulid development and acoel phylogenomics.

    Everything I’m doing is documented on GitHub: https://github.com/nelas/bcv-at-brown

     
  • Bruno Vellutini 10:52 on 2013/10/10 Permalink
    Tags: gene expression, ,   

    Priapulus profiling initial 


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    Screenshot 2013-10-10 09.38.45

    I ran a basic RSEM analysis during the weekend to calculate the expression levels for Priapulus stages. Now I’m following the stepsfor the visualization of the results. The photo above shows the expression levels of the same for different stages. I’m converting WIG files exported with RSEM to TDF to be visualized in IGV.

     
  • Bruno Vellutini 15:03 on 2011/07/15 Permalink
    Tags: , gene expression,   

    Polypide development in ancestrula and budding 


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    Are the developmental mechanisms regulating the polypide development in the ancestrula similar to the mechanisms regulating polypide development after asexual budding?

    Look for possibly related articles.

     
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